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Getting Started
Cluster Quick Start Guide
Command line access using a terminal
How Do I Get a FAS Research Computing Account?
Introduction to the FASRC Cluster -- Online
OpenAuth
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Running Jobs
Using Duo Mobile to display your RC two-factor code
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Accounts
Account confirmation email contents
Account is locked
Account Qualifications and Affiliations
Cluster Account Signup
Editing your .bashrc
How do I fairly manage dual/multiple lab affiliations for work on the FASRC cluster?
How Do I Get a FAS Research Computing Account?
How do I request membership in an additional lab group?
Manual OpenAuth Token Setup (advanced)
OpenAuth
OpenAuth token on a new device
Reset Password
Temporary Class Accounts
Using Duo Mobile to display your RC two-factor code
VPN Proxy Settings instructions
What happens to my FASRC account when I leave, graduate, or become an external collaborator?
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Login & Authentication
Access and Login FAQ
Account is locked
Cluster Quick Start Guide
Command line access using a terminal
Connecting to the FAS RC VPN from Linux clients
GNU Screen
How to log in to the cluster
OpenAuth
OpenAuth token on a new device
OpenAuth Troubleshooting
Reset Password
SSH key error, DNS spoofing message
Synchronizing clocks
Using Duo Mobile to display your RC two-factor code
Using SSH ControlMaster for Single Sign-On
VPN Proxy Settings instructions
VPN Setup
X11 forwarding for lightweight graphical applications
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FAQs
Account is locked
Center for Education Policy Research (CEPR) FAQs
CentOS 7 Transition FAQ
Cluster Customs and Responsibilities
Common Cluster Pitfalls
Frequently Asked Questions (FAQ)
Grant Support
Hardware, Software, and Storage Purchasing
Harvard T.H. Chan School of Public Health
Harvard T.H. Chan School of Public Health + FAS Research Computing Q&A
Harvard T.H. Chan School of Public Health - FAS Research Computing Overview
How do I fairly manage dual/multiple lab affiliations for work on the FASRC cluster?
How do I figure out how efficient my job is?
How Do I Get a FAS Research Computing Account?
Reset Password
SPINAL Expense Code Guide for Laboratory Financial Administrators
SSH key error, DNS spoofing message
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Running Jobs
Cluster Customs and Responsibilities
Command line access using a terminal
Common Cluster Pitfalls
Convenient SLURM Commands
Editing your .bashrc
Fairshare and Job Accounting
Format of Output File
GPU Computing on the FASRC cluster
How do I fairly manage dual/multiple lab affiliations for work on the FASRC cluster?
How do I figure out how efficient my job is?
HUCE Partitions
Hybrid (MPI+OpenMP) Codes on the FASRC cluster
MATLAB Parallel - PCT and DCS
MATLAB Parallel Computing Toolbox simultaneous job problem
MPI Software on the FASRC cluster
R-MPI
Running Jobs
SBGrid Software for Structural Biologists
Sequencing
SLURM Memory Limits
Slurm memory limits
Submitting Large Numbers of Jobs to the FASRC cluster
Troubleshooting Jobs on the Cluster
X11 forwarding for lightweight graphical applications
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Software
Abaqus
Alignment
All modules - Module Search
Application Types
BLAST
CERN ROOT software
Citrix
Comsol
Concaterpillar
EasyBuild
FAS Licensed Software for Local Use
Format of Output File
Fortran and Mixed Language Codes on the FASRC cluster
Git - Apple license requirement message
Git and Github on the FASRC cluster
GNU Science Library
Gnuplot
GraphViz
HeLmod
HELMOD FAQ
How to build and install an app
Hybrid (MPI+OpenMP) Codes on the FASRC cluster
Installing Software Yourself
iPython Notebook
Julia with Jupyter notebooks on the cluster
Jupyter notebook server on the cluster
Lmod modules -- introduction and instructions
Lumerical
Mathematica GUI Fonts
MATLAB
MATLAB Figures in a Batch Mode
MATLAB Parallel - PCT and DCS
MATLAB Parallel Computing Toolbox simultaneous job problem
Migrate
MPI for Python (mpi4py) on the FASRC cluster
MPI Software on the FASRC cluster
NCF VDI Apps
NGS Analysis with R
OpenFoam
OpenMP Software on the FASRC cluster
Optimization
Parallel Computing on the cluster
Perl
Python
R - Basics
R - Packages
R-MPI
Ruby
Schrodinger Suite
Singularity on the cluster
Software
Software Development on the FASRC cluster
Stata on the FASRC cluster
Summary.htm Details
TensorFlow on the cluster
TOTALVIEW: Debugging Parallel Applications
Trinity
Using KNITRO with MATLAB
VDI Apps
Virtual Desktop (VDI) through Open OnDemand
X11 forwarding for lightweight graphical applications
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Instrument
Instrument Sign-up
Scientific Instrument Reservations and Billing (SPINAL)
Sequencing
SPINAL Usage Guide for Laboratory Administrators
SPINAL Usage Guide for Researchers
Storage
Cluster storage
Copying Data to & from the FASRC cluster using SCP or SFTP
Data Security – Information on Storage and Use of Confidential Data (HRCI)
Globus File Transfer
Mounting Storage on Desktop or Laptop
Policy: scratch space
rclone - transfer files to/from cloud storage
rdiff-backup
rsync
Sequencing
SFTP file transfer using Filezilla - Filtering
SFTP file transfer using Filezilla (Mac/Windows/Linux)
Transferring Data Externally
Transferring Data on the Cluster
Transferring files to DATA.RC
Unix permissions
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Security
Data and Data Use Agreements (DUA)
Data Security – Information on Storage and Use of Confidential Data (HRCI)
Nielsen Dataset
Proxy Settings
Other
Find-n-Replace
Grant Support
Hardware, Software, and Storage Purchasing
Instrument Sign-up
Other Resources
SPINAL Expense Code Guide for Laboratory Financial Administrators
Support
Unix permissions
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Policy
Account Qualifications and Affiliations
Cluster Customs and Responsibilities
Data and Data Use Agreements (DUA)
Data Security – Information on Storage and Use of Confidential Data (HRCI)
Policy: scratch space
Submitting Large Numbers of Jobs to the FASRC cluster
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Training
Training Links
Training Materials
Research Software Engineering
Research Software Engineering (RSE) Services
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